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This page shows all 430 data sets currently available in our Data repository

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PREPRINT: Comparative multivariate decoding adjudicates theories of semantic representation in the anterior temporal lobes and the rest of the cortex
Authors:
FRISBY, S., Cox, C.R., HALAI, A.D., LAMBON RALPH, M.A., & Rogers, T.T.
Reference:
bioRxiv
Year of publication:
In Press
CBU number:
9274
Abstract:
The anterior temporal lobes (ATLs) are known to support semantic cognition, but theories about their precise representational coding vary. We collected 7T-fMRI data with a novel acquisition sequence designed to improve signal quality in the ATLs, then employed a pioneering analytical approach (comparative multivariate decoding) to adjudicate between theories. Specifically, we applied multiple decoding methods, each making different assumptions about the content, nature or location of representations within the ATLs, then used the pattern of results across methods to adjudicate competing hypotheses. The results suggest that the ATLs represent domain-general semantic information via a multidimensional vector-space code that is anatomically clustered within and across individuals, and that posterior temporal and occipitotemporal regions utilize a similar domain-general, vector-space code. More generally, the comparative multivariate analytical framework utilized here has the potential to reveal how the brain represents, not just semantic knowledge, but any kind of information.
Data available, click to request
PREPRINT: Optimising 7T-fMRI for imaging regions of magnetic susceptibility
Authors:
FRISBY, S., CORREIA, M.M., Zhang, M., Rodgers, C.T., Rogers, T.T., LAMBON RALPH, & HALAI, A.D.
Reference:
bioRxiv
Year of publication:
In Press
CBU number:
9273
Abstract:
The temporal signal-to-noise ratio (tSNR) of functional magnetic resonance imaging (fMRI) is particularly poor in ventral anterior temporal and orbitofrontal regions because of B0 and B1+ magnetic field inhomogeneity, a problem that is exacerbated at higher field strengths. In this 7T-fMRI study we compared three methods of improving sensitivity in these areas: parallel transmit, which uses multiple transmit elements, controlled independently, to homogenise the flip angle experienced by the tissue; multi-echo, which entails collection of multiple volumes at different echo times following a single radiofrequency pulse; and multiband, in which multiple slices are acquired simultaneously. We found that parallel transmit and multi-echo increased the magnitude of the BOLD signal change, but only multi-echo increased BOLD magnitude in areas prone to susceptibility artefacts. Multiband and denoising of multi-echo data with independent components analysis (ICA) both improved precision of GLM fit. Exploratory results suggested that multi-echo and ICA denoising can both benefit multivariate analyses. In conclusion, a multi-echo, multiband sequence improved fMRI quality in areas prone to susceptibility artefacts while maintaining sensitivity across the whole brain. We recommend this approach for studies investigating the functional roles of ventral temporal and orbitofrontal regions with 7T fMRI.
Data available, click to request
ADHD and intelligence polygenic scores associations with developmental dimensions in children with attention, learning and memory difficultie
Authors:
Santangelo, A.M., Ohlei, O., Mareva, S., Brkic, D., CALM Team, Bertram, L., Holmes, J., ASTLE, D., & BAKER, K.
Reference:
European Child and Adolescent Psychiatry
Year of publication:
2026
CBU number:
9272
Abstract:
Common genetic variants make a significant contribution to neurodevelopmental characteristics such as cognitive abilities and ADHD symptoms. The relevance and structure of these associations amongst children with transdiagnostic difficulties in cognition, attention and learning has not been explored. Polygenic scores (PGS) derived from the largest genome-wide association study (GWAS) data at the time of this study on ADHD (38,691 individuals with ADHD and 186,843 controls) and Intelligence (269,867 individuals) were calculated for 524 children and young people (5-18 years old) referred to the Centre for Attention, Learning and Memory (CALM). PGS-trait associations were assessed via linear regression analyses, for a range of cognitive and behavioural dimensional measures, and factor scores from a hierarchical model of psychopathology. PGS associations were explored with and without co-varying for socio-economic status (SES). Within this sample, we found the expected positive associations between ADHD-PGS and ADHD primary symptoms, and between Intelligence-PGS and IQ. ADHD-PGS were also associated with broader externalising behaviours and intelligence scores, and these associations remained significant after removing ADHD-diagnosed participants, or after covarying with SES. Intelligence-PGS showed associations with verbal and non-verbal cognitive skills, but no significant associations with ADHD traits were detected. For the hierarchical model of psychopathology, ADHD-PGS, but not intelligence-PGS, showed associations with the general mental health factor, externalising factor, and social maladjustment factor, only when SES was not included as a covariate. In summary, PGS for neurodevelopmental traits may contribute to both general and specific cognitive and behavioural dimensions in a paediatric transdiagnostic sample. Future studies investigating PGS associations with neural correlates, as well as gene-by-environment interactions, will contribute to our understanding of developmental pathways and risk-resilience mechanisms in child mental health. Data files are available to collaborators via the CALM data repository
Data available, click to request
Genetic risk of Alzheimer’s disease is associated with loss of brain network segregation in midlife
Authors:
Deng, F, HENSON, R.N., Muniz-Terrera, G., Malhotra, P., O’Brien, J.T., Ritchie, C.W., Lawlor, B. & Naci, L.
Reference:
Communications Biology
Year of publication:
In Press
CBU number:
9269
Abstract:
Alzheimer’s disease (AD) neuropathology starts decades before clinical manifestations, but the early indicators of AD in midlife remain unclear. Functional segregation of brain networks is a key marker of brain health. It remains unknown, however, whether inherited risk of AD impacts network segregation from midlife in individuals who are cognitively healthy but carry inherited risk for late-life AD. To address this question, we investigate which brain networks show the strongest age-related segregation loss in the Cam-CAN lifespan cohort (18-88 years, N=652), and whether APOE ε4 genotype impacts segregation of age-vulnerable networks in the midlife PREVENT cohort (40-59 years, N=210), cross-sectionally and longitudinally. Higher-order networks showing the most significant age-related decline are the default mode (DMN), frontal-parietal control (FPN) and salience (SN) networks. Cognitively healthy midlife APOE ε4 carriers have higher segregation across the brain cross-sectionally, accompanied by greater longitudinal decline in the DMN over two years, relative to non-carriers. Higher DMN segregation is associated with better episodic and relational memory across the PREVENT cohort. These findings suggest that functional segregation may serve as a potential biomarker, providing insights into the mechanisms through which APOE influences brain function and cognition from healthy midlife, on average 23 years before dementia onset.
URL:
Data available, click to request
Sequence learning as Bayesian filtering
Authors:
NORRIS, D. & Kalm, K.
Reference:
Psychological Review
Year of publication:
-
CBU number:
9268
Abstract:
Here we present a model of sequence learning and recall based on the idea that the function of memory is to maintain an up-to-date representation of the environment that can be used to guide future perception and action. The representation of the environment is considered to be a prior which is combined with information in short-term memory to construct a posterior representation. That posterior representation drives recall and, in turn, is used to update the priors. This prediction-update cycle is a form of Bayesian filter. We apply the model to data from the Hebb (1961) task in which participants learn sequences over repeated presentations in an immediate serial recall task. The model is shown to simulate a wide range of data on the Hebb effect including the ability to learn multiple lists at once, the effect of list spacing, the differential impact of variation in the beginning versus end of lists, learning from response errors, interference between similar lists, and the effects of repetition on forward and backward recall. The model’s ability to account for these phenomena follows directly from its basic computational principles.
Data for this project is available at: https://github.com/DennisNorris/Bayesian_filter_hebb
Universal rhythmic architecture uncovers two modes of neural dynamics
Authors:
KARVAT, G., CRESPO-GARCIA, M., Vishe, G., ANDERSON, M.C., & Laundau, A.N.
Reference:
Nature Communications
Year of publication:
2026
CBU number:
9264
Abstract:
Understanding the organizing principles of brain activity can advance neurotechnology and medical diagnosis. Traditionally, neural activity is viewed as consisting oscillations in distinct frequency bands. However, emerging evidence suggests these oscillations often manifest as transient bursts rather than sustained rhythms. We examine the hypothesis that rhythmicity (sustained vs bursty) adds a further dimension to brain organization. Using a rhythmicity measure, we segment neurophysiological spectra from 859 participants across datasets, species, recording techniques, ages 18–88, sexes, brain regions, and cognitive states in health and disease. Our results reveal a universal rhythmicity-resolved spectral architecture with two categories: high-rhythmicity bands exhibiting sustained oscillations and new low-rhythmicity bands dominated by brief bursts. This architecture reflects two modes of operation: sustained bands suitable for maintaining ongoing activity, and transient bands which can signal responses to change. The rhythmicity-resolved architecture provides a unifying framework that bridges human and non-human findings, enables individualized spectral definitions, and offers a principled basis for understanding brain activity.
URL:
Data for this project is available at: https://github.com/laaanchic/LAVI 11
Adolescent social media use and its association with mental health: a cross-sectional study in Bradford, England
Authors:
Pickavance, J., O'Nions, E., Hammad, M., Jackson, L., Lightfoot, K., McEachan, ORBEN, A., Ryan. D., Shire, K., Wood, M.L., Wright, J. Lewer, D.
Reference:
BMC Public Health
Year of publication:
2026
CBU number:
9262
Abstract:
Background Social media is a central part of the lives of adolescents in 2025. The recent rise of short-form content and gamification features has coincided with an increasing prevalence of mental health problems among this age group. Many policy makers are considering restrictions to the amount of time under-16s spend on social media. Despite this, there is limited contemporary evidence about the extent of their social media use, nor meaningful estimates of the effect a reduction may have on their mental health. Here, we estimate daily social media usage for adolescents in the culturally and ethnically diverse city of Bradford, England, plus its association with their mental health. Method We did a cross-sectional analysis of data from Born in Bradford: Age of Wonder 2023-24, a school-based survey of students aged 12–15 (n = 8,466). We weighted the sample to be representative of the city-wide population of 12–15-year-olds and report the median daily screen time spent on social media apps by age, sex, and ethnicity. We used a log-linear model to estimate the effect of daily social media screen time on anxiety and depression symptoms (RCADS-25), adjusting for age, sex, ethnicity, free school meal eligibility, special educational needs, deprivation, and season of survey completion. Predictions from this model were used to estimate the change in prevalence of clinical threshold symptomatology associated with a range of daily screen time limits. Results The median time spent using social media apps was 3.36 h per day (IQR 1.88–5.44). Longer durations of social media use were associated with greater mental health symptoms after adjustment for potential confounders. In a scenario where this association is causal, capping social media use at a maximum of 3 h per day would lead to a 1.25ppt (95% CI 0.74ppt – 1.76ppt) decrease in the prevalence of clinical threshold symptomatology (a reduction from 10.7% to 9.5%), equivalent to 13 fewer cases in a typical school of 1000 pupils. Conclusions All groups of adolescents spend a large of amount of time using social media apps each day. We observed a significant association between social media use and symptoms of anxiety and depression. Assuming a causal relationship, daily time limits placed on social media may yield meaningful reductions in anxiety and depression symptomatology. Nevertheless, we cannot demonstrate strong evidence of a causal relationship, and robust methods such as controlled trials or natural experiments are needed to precisely determine the benefits and harms of policies restricting access for under-16s. Key practitioner message What is known? Meta-analytic evidence links more time spent on social media usage to poorer mental health, but there is limited contemporary data, existing studies underrepresent less advantaged adolescents, and effect sizes are poorly contextualised. What is new? Data from >8,000 adolescents aged 12-15 in a diverse urban setting in England indicate a median usage of 3.36 hours per day (IQR 1.88-5.44) on a normal school week. Although some subgroups report lower use of social media, all subgroups have a median use of 2.61 hours or more. Capping the daily limit to 3-hours would reduce usage for more than half of 12-15-year-olds and was equivalent to a 1.25 percentage point reduction in the absolute prevalence of clinical threshold anxiety and depression symptomatology. What is significant for clinical practice? Daily usage limits could be associated with meaningful reductions in anxiety and depression for young people. Nevertheless, estimation of causal effects of social media use on mental health is difficult for methodological reasons. Experimental trials are required to determine the benefits and harms of policies restricting social media access for under-16s.
URL:
Data for this project is available at: https://doi.org/10.17605/OSF.IO/ZP3GN
Stable Individual Differences Dominate Adult Brain Volume Variation Until Later Life.
Authors:
Grødem, E.O.S., Vidal-Pineiro, D., Sørensen, O., Bartr´es-Faz, D., Brandmaier, A.M., Cattaneo, G., Garrido, P.F., HENSON, R.N., Kuhn, S., Lindenberger, U., MacIntosh, B.J., Nyberg, L., Pascual-Leone, A., Smith, S.M., Sol´e-Padull´es, C., Solana-S´anchez, J., Otto Watne, L., Walhovd, K.B., Bjørnerud, A., Fjell1, A.M.
Reference:
Imaging Neuroscience
Year of publication:
2026
CBU number:
9260
Abstract:
Individual differences in the volumes of brain structures are often linked to various conditions, including Alzheimer’s disease, schizophrenia, and overall brain health. However, it remains unclear to what extent these differences reflect individual levels present from young adulthood or diverging aging trajectories from later ages. In this study, we analyze the aging dynamics of the volumes of six brain structures based on magnetic resonance imaging (MRI) scans from a large cross-cohort longitudinal sample of cognitively healthy adults (n = 8,311 with 18,520 MRIs, ages from 18 to 97 years). From general assumptions about structural brain dynamics and measurement noise, a stochastic dynamical model was fitted to the data to estimate both the variability and persistence of structural changes across adulthood. Using this model, we calculated how much of the variance of volumetric differences between individuals can be attributed to stable levels from young adulthood versus systematic changes at older ages, as well as the theoretical sensitivity of longitudinal studies to detect individual differences in change. The findings were as follows: 1) Before age 60 years, inter-individual differences in neuroanatomical volumes almost exclusively reflect stable differences between individuals, while the influence from systematic differences in rate-of-change increases thereafter; up to 50 % of the variation being due to differences in change at 80 years. In contrast, ventricular volume reflects differences in change from early adulthood. 2) Current brain-age models are unlikely to be sensitive to detect differences in aging trajectories. 3) Imaging studies have low reliability in detecting inter-individual brain changes before age 60. After 60 years , the study reliability increases sharply with longer intervals between scans and more modestly with additional intermediate observations. In conclusion, our results reinforce the view that it is critical to distinguish stable earlyadulthood levels from systematic differences in change when studying adult brain aging.
URL:
Data for this project is available at: https://github.com/EdvardGrodem/brain-trajectories
All spectral frequencies of neural activity reveal semantic representation in the human anterior ventral temporal cortex
Authors:
FRISBY, S.L., HALAI, A.D., Cox, C.R., Clark, A., Shimotake, A., Kikuchie, T., Kuneida, T., Arakawa, Y., Takahashi, R., Ikeda, A., Matsumoto, R., Rogers, T.T. & LAMBON RALPH, M.
Reference:
Imaging Neuroscience, 4: IMAG.a.1201.
Year of publication:
2026
CBU number:
9259
Abstract:
Intracranial electrophysiology offers a unique insight into the nature of information representation in the brain – it can be used to disentangle information encoded in gamma and high gamma frequencies from information encoded in lower frequencies. We used regularised logistic regression to decode animacy from time-frequency power and phase extracted from electrocorticography (ECoG) grid electrode data recorded on the surface of human vATL. Power in gamma (30 – 60 Hz) and high gamma (60 – 200 Hz) produced reliable decoding, indicating that semantic information is indeed expressed by local populations in vATL. However, power from a wide range of frequencies (4 – 200 Hz) produced significantly higher decoding accuracy and also exhibited the same rapidly-changing dynamic code previously observed when decoding voltage. These findings support the theory that semantic information is encoded by a local vATL “hub” that interacts with distributed cortical “spokes”. We are unable to share raw data for this study because patients did not provide informed consent for us to do so. However, matrices containing power, phase, and voltage features (columns) for each stimulus (rows) are available at https://osf.io/m5v42/ . Code is available at https://github.com/slfrisby/ECoG_LASSO .
URL:
Data for this project is available at: https://osf.io/m5v42/
Does Signed Prediction Error drive Declarative Memory? Evidence from Variable Choice Paradigms
Authors:
GURUNANDAN, K., GREVE, A., Wilmot, E. & HENSON, R.N.
Reference:
Memory & Cognition
Year of publication:
2026
CBU number:
9257
Abstract:
Prediction error (PE) is the discrepancy between predictions and new information. For a binary reward outcome, PE may be signed (positive if the outcome was better than predicted, and negative if the outcome was worse than predicted), or unsigned (absolute value of “surprise”). Using a “variable choice” paradigm, De Loof et al. (2018) examined the role of PE in one-shot learning of unknown translations of known words, and showed that associative memory for the translation was greater when (financial) reward was more unexpected, and lesser when an expected reward was not received (i.e., signed PE); an effect that they replicated in several subsequent studies. However, other work on PE in declarative memory has assumed that memory is greater when an outcome is more unexpected, without any explicit reward (i.e., unsigned PE). We replicated De Loof et al.’s paradigm with and without financial reward, and found that memory was explained slightly better by unsigned PE (Experiments 1A-1B). However, we also identified a potential confound in the paradigm that could explain the results without any role of PE, as confirmed by simulations. We therefore designed a modified version of the paradigm that circumvents this confound (Experiment 2). Results were inconsistent with the PE account. We conclude that variable choice paradigms may not be well-suited to investigate the role of PE in one-shot declarative learning, and that the purported role of signed PE in declarative memory requires further investigation.
URL:
Data for this project is available at: https://osf.io/b48ga


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