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Data Repository


This page shows all 343 data sets currently available in our Data repository

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Improved tactile speech robustness to background noise with a dual-path recurrent neural network noise-reduction method
Authors:
Fletcher, M.D., Perry, S.W., Thoidis, I., Verschuur, C.A., Goehring, T.
Reference:
Scientific Reports
Year of publication:
In Press
CBU number:
8975
Abstract:
Many people with hearing loss struggle to understand speech in noisy environments, making noise robustness critical for hearing-assistive devices. Recently developed haptic hearing aids, which convert audio to vibration, can improve speech-in-noise performance for cochlear implant (CI) users and assist those unable to access hearing-assistive devices. They are typically body-worn rather than head-mounted, allowing additional space for batteries and microprocessors, and so can deploy more sophisticated noise-reduction techniques. The current study assessed whether a real-time-feasible dual-path recurrent neural network (DPRNN) can improve tactile speech-in-noise performance. Audio was converted to vibration on the wrist using a vocoder method, either with or without noise reduction. Performance was tested for speech in a multi-talker noise (recorded at a party) with a 2.5-dB signal-to-noise ratio. An objective assessment showed the DPRNN improved the scale-invariant signal-to-distortion ratio by 8.6 dB and substantially outperformed traditional noise-reduction (log-MMSE). A behavioural assessment in 16 participants showed the DPRNN improved tactile-only sentence identification in noise by 8.2%. This suggests that advanced techniques like the DPRNN could substantially improve outcomes with haptic hearing aids. Low-cost haptic devices could soon be an important supplement to hearing-assistive devices such as CIs or offer an alternative for people who cannot access CI technology.
Data available, click to request
Exploring the Use of Interleaved Stimuli to Measure Cochlear-Implant Excitation Patterns
Authors:
GUERIT, F., Middlebrookes, J.C., Grainsier, R., Richardson, M.L., Wouters, J., CARLYON, R.P.
Reference:
Journal of the Association for Research in Otolaryngology
Year of publication:
In Press
CBU number:
8973
Abstract:
Attempts to use current-focusing strategies in cochlear-implant (CI) stimulation to reduce neural spread-of-excitation have met with only mixed success in human CI studies, in contrast to promising results in animal studies. Although this discrepancy could stem from between-species anatomical and aetiological differences, it may be that the masking experiments used in human studies are insufficiently sensitive to differences in excitation-pattern width. We used an interleaved-masking method to measure psychophysical excitation patterns in seven participants with four masker stimulation configurations: monopolar (MP), partial tripolar (pTP), a wider partial tripolar (pTP+2), and, importantly, a condition (RP+2) designed to produce a broader excitation pattern than MP. The probe was always in partial-tripolar configuration. We found a significant effect of stimulation configuration on both the amount of on-site masking (mask and probe on same electrode; an indirect indicator of sharpness) and the difference between off-site and on-site masking. Differences were driven solely by RP+2 producing a broader excitation pattern than the other configurations, whereas monopolar and the two current-focusing configurations did not statistically differ from each other. Hence a method that is sensitive enough to reveal a modest broadening in RP+2 showed no evidence for sharpening with focussed stimulation. We also showed that although voltage recordings from the implant accurately predicted a broadening of the psychophysical excitation patterns with RP+2, they wrongly predicted a strong sharpening with pTP+2. We additionally argue, based on our recent research, that the interleaved-masking method can usefully be applied to non-human species and objective measures of CI excitation patterns.
URL:
Recognition of animal faces is impaired in developmental prosopagnosia
Authors:
Epihova, G., Cook, R., Andrews, T.J.
Reference:
Cognition
Year of publication:
In Press
CBU number:
8969
Abstract:
An on-going debate in psychology and neuroscience concerns the way faces and objects are represented. Domain-specific theories suggest that faces are processed via a specialised mechanism, separate from objects. Developmental prosopagnosia (DP) is a neurodevelopmental disorder in which there is a deficit in the ability to recognize conspecific (human) faces. It is unclear, however, whether prosopagnosia also affects recognition of heterospecific (animal) faces. To address this question, we compared recognition performance with human and animal faces in neurotypical controls and participants with DP. We found that DPs showed deficits in the recognition of both human and animal faces compared to neurotypical controls. In contrast to, we found no group-level deficit in the recognition of animate or inanimate non-face objects in DPs. Using an individual-level approach, we demonstrate that in 60% of cases in which face recognition is impaired, there is a concurrent deficit with animal faces. Together, these results show that DPs have a general deficit in the recognition of faces that encompass a range of configural and morphological structures.
Linguistic and attentional factors – not statistical regularities – contribute to word-selective neural responses with FPVS-oddball paradigms
Authors:
Lochy, A., Rossion, B., LAMBON RALPH, M., Volfart, A., HAUK, O., & Schiltz, C.
Reference:
Cortex
Year of publication:
In Print
CBU number:
8966
Abstract:
Studies using frequency-tagging in electroencephalography (EEG) have dramatically increased in the past 10 years, in a variety of domains and populations. Here we used Fast Periodic Visual Stimulation (FPVS) combined with an oddball design to explore visual word recognition. Given the paradigm’s high sensitivity, it is crucial for future basic research and clinical application to prove its robustness across variations of designs, stimulus types and tasks. This paradigm uses periodicity of brain responses to measure discrimination between two experimentally defined categories of stimuli presented periodically. EEG was recorded in 22 adults who viewed words inserted every 5 stimuli (at 2 Hz) within base stimuli presented at 10 Hz. Using two discrimination levels (deviant words among nonwords or pseudowords), we assessed the impact of relative frequency of item repetition (set size or item repetition controlled for deviant vs. base stimuli), and of the orthogonal task (focused or deployed spatial attention). Word-selective occipito-temporal responses were robust at the individual level (significant in 95% of participants), left-lateralized, larger for the prelexical (nonwords) than lexical (pseudowords) contrast, and stronger with a deployed spatial attention task as compared to the typically used focused task. Importantly, amplitudes were not affected by item repetition. These results help understanding the factors influencing word-selective EEG responses and support the validity of FPVS-EEG oddball paradigms, as they confirm that word-selective responses are linguistic. Second, they show its robustness against design-related factors that could induce statistical (ir)regularities in item rate. They also confirm its high individual sensitivity and demonstrate how it can be optimized, using a deployed rather than focused attention task, to measure implicit word recognition processes in typical and atypical populations. https://osf.io/kvfgx/?view_only=81e93bcb54eb45a791e94793eec731a4).
Data available, click to request
Neural Evidence of Functional Compensation for Fluid Intelligence in Healthy Ageing
Authors:
KNIGHTS, E., HENSON, R.N., Morcom, A.M., MITCHELL, D.J., Tsvetanov, K.A.
Reference:
ELife
Year of publication:
In Press
CBU number:
8963
Abstract:
Functional compensation is a common notion in the neuroscience of healthy ageing, whereby older adults are proposed to recruit additional brain activity to compensate for reduced cognitive function. However, whether this additional brain activity in older participants actually helps their cognitive performance remains debated. We examined brain activity and cognitive performance in a human lifespan sample (N=223) while they performed a problem-solving task (based on Cattell’s test of fluid intelligence) during functional magnetic resonance imaging (fMRI). Whole-brain univariate analysis revealed that activity in bilateral cuneal cortex for hard vs. easy problems increased both with age and with performance, even when adjusting for an estimate of age-related differences in cerebrovascular reactivity. Multivariate Bayesian decoding further demonstrated that age increased the likelihood that activation patterns in this cuneal region provided non-redundant information about the two task conditions, beyond that of the multiple-demand network generally activated in this task. This constitutes some of the strongest evidence yet for functional compensation in healthy ageing, at least in this brain region during visual problem-solving.
Data available, click to request
Basis of executive functions in fine-grained architecture of cortical and subcortical human brain networks
Authors:
ASSEM, M., SHASHIDHARA, S., Glasser, M.F., DUNCAN, J.
Reference:
Cerebral Cortex
Year of publication:
In Press
CBU number:
8961
Abstract:
Theoretical models suggest that executive functions rely on both domain-general and domain-specific processes. Supporting this view, prior brain imaging studies have revealed that executive activations converge and diverge within broadly characterized brain networks. However, the lack of precise anatomical mappings has impeded our understanding of the interplay between domain-general and domain-specific processes. To address this challenge, we used the high-resolution multimodal magnetic resonance imaging approach of the Human Connectome Project to scan participants performing 3 canonical executive tasks: n-back, rule switching, and stop signal. The results reveal that, at the individual level, different executive activations converge within 9 domain-general territories distributed in frontal, parietal, and temporal cortices. Each task exhibits a unique topography characterized by finely detailed activation gradients within domain-general territory shifted toward adjacent resting-state networks; n-back activations shift toward the default mode, rule switching toward dorsal attention, and stop signal toward cingulo-opercular networks. Importantly, the strongest activations arise at multimodal neurobiological definitions of network borders. Matching results are seen in circumscribed regions of the caudate nucleus, thalamus, and cerebellum. The shifting peaks of local gradients at the intersection of task-specific networks provide a novel mechanistic insight into how partially-specialized networks interact with neighboring domain-general territories to generate distinct executive functions.
Data available, click to request
Representational similarity learning reveals a graded multidimensional semantic space in the human anterior temporal cortex
Authors:
Cox, C.R., Rogers, T.T., Shimotakem A., Kikuchi, T., Kunieda, T., Miyamoto, S., Takahashi, R., Matsumoto, R., Ikeda, A., LAMBON RALPH, M.A.
Reference:
Imaging Neuroscience
Year of publication:
In Press
CBU number:
8960
Abstract:
Neurocognitive models of semantic memory have proposed that the ventral anterior temporal lobes (vATLs) encode a graded and multidimensional semantic space—yet neuroimaging studies seeking brain regions that encode semantic structure rarely identify these areas. In simulations we show that this discrepancy may arise from a crucial mismatch between theory and analysis approach. Utilizing an analysis recently formulated to investigate graded multidimensional representations, representational similarity learning (RSL), we decoded semantic structure from ECoG data collected from the vATL cortical surface while participants named line drawings of common items. The results reveal a graded, multidimensional semantic space encoded in neural activity across the vATL, which evolves over time and simultaneously expresses both broad and finer-grained semantic structure amongst animate and inanimate concepts. The work resolves the apparent discrepancy within the semantic cognition literature and, more importantly, suggests a new approach to discovering representational structure in neural data more generally.
Data available, click to request
Overlapping effects of neuropsychiatric symptoms and circadian rhythm on effort-based decision-making
Authors:
MEHRHOF, S.A. NORD, C.
Reference:
eLife
Year of publication:
In Press
CBU number:
8959
Abstract:
Motivational deficits are common in several brain disorders and motivational syndromes like apathy and anhedonia predict worse outcomes. Disrupted effort- based decision-making may represent a neurobiological underpinning of motivational deficits, shared across neuropsychiatric disorders. We measured effort-based decision-making in 994 participants using a gamified online task, combined with computational modelling, and validated offline for test-retest reliability. In two pre-registered studies, we first replicated studies linking impaired effort-based decision-making to neuropsychiatric syndromes, taking both a transdiagnostic and a diagnostic-criteria approach. Next, testing participants with early and late circadian rhythms in the morning and evening, we find circadian rhythm interacts with time-of-testing to produce overlapping effects on effort-based decision-making. Circadian rhythm may be an important variable in computational psychiatry, decreasing reliability or distorting results when left unaccounted for. Disentangling effects of neuropsychiatric syndromes and circadian rhythm on effort-based decision-making will be essential to understand motivational pathologies and to develop tailored clinical interventions.
Data available, click to request
Unique information from common diffusion MRI models about white-matter differences across the human adult lifespan
Authors:
Henriques, R.N., HENSON, R. Cam-CAN & CORREIA, M.M.
Reference:
Imaging Neuroscience
Year of publication:
In Press
CBU number:
8947
Abstract:
Diffusion Magnetic Resonance Imaging (dMRI) is sensitive to white matter microstructural changes across the human lifespan. Several models have been proposed to provide more sensitive and specific metrics than those provided by the conventional Diffusion Tensor Imaging (DTI) analysis. However, previous results using different metrics have led to contradictory conclusions regarding the effect of age on fibre demyelination and axonal loss in adults. Moreover, it remains unclear whether these metrics provide distinct information about the effects of age, e.g., on different white-matter tracts. To address this, we analysed dMRI data from 651 adults approximately uniformly aged from 18 to 88 years in the Cam-CAN cohort, using six dMRI metrics: Fractional Anisotropy (FA) from standard DTI; Mean Signal Diffusion (MSD) and Mean Signal Kurtosis (MSK) from Diffusional Kurtosis Imaging (DKI) applied to directional averaged diffusion-weighted signals; and Neurite Density Index (NDI), Orientation Dispersion Index (ODI) and isotropic Free water volume fraction (Fiso) estimated from Neurite Orientation Dispersion and Density Imaging (NODDI). Averaging across white-matter regions-of-interest (ROIs), second-order polynomial fits revealed that MSD, MSK and Fiso showed the strongest effects of age, with significant quadratic components suggesting more rapid and sometimes inverted effects in old age. Analysing the data in different age subgroups revealed that some apparent discrepancies in previous studies may be explained by the use of cohorts with different age ranges. Factor analysis of the six metrics across all ROIs revealed three independent factors that can be associated to 1) tissue microscopic properties (e.g. differences in fibre density/myelin), 2) free-water contamination, and 3) tissue configuration complexity (e.g. crossing, dispersing, fanning fibres). While FA captures a combination of different factors, other dMRI metrics are strongly aligned to specific factors (NDI and MSK with Factor 1, Fiso with Factor 2, and ODI with Factor 3). To assess whether directional diffusion and kurtosis quantities provide additional information about the effects of age, further factor analyses were also performed, which showed that additional information about the effects of age may be present in radial and axial kurtosis estimates (but not standard axial and radial diffusivity). In summary, our study offers an explanation for previous discrepancies reported in dMRI ageing studies and provides further insights on the interpretation of different dMRI metrics in the context of white matter microstructural properties.
Data available, click to request
Cycles of goal silencing and reactivation underlie complex problem-solving in primate frontal and parietal cortex
Authors:
Watanabe, K., Kadoshina,, M, Kusunoki, M, Buckley, M.J., DUNCAN, J.
Reference:
Nature Communication
Year of publication:
In Press
CBU number:
8946
Abstract:
While classic views proposed that working memory (WM) is mediated by sustained firing, recent evidence suggests a contribution of activity-silent states. Within WM, human neuroimaging studies suggest a switch between attentional foreground and background, with only the foregrounded item represented in active neural firing. To address this process at the cellular level, we recorded prefrontal (PFC) and posterior parietal (PPC) neurons in a complex problem-solving task, with monkeys searching for one or two target locations in a first cycle of trials, and retaining them for memory-guided revisits on subsequent cycles. When target locations were discovered, neither frontal nor parietal neurons showed sustained goal-location codes continuing into subsequent trials and cycles. Instead there were sequences of timely goal silencing and reactivation, and following reactivation, sustained states until behavioral response. With two target locations, goal representations in both regions showed evidence of transitions between foreground and background, but the PFC representation was more complete, extending beyond the current trial to include both past and future selections. In the absence of unbroken sustained codes, different neuronal states interact to support maintenance and retrieval of WM representations across successive trials.
Data available, click to request


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